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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86994141_87060253_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

86994141 - 87060253

Intron Length:

66113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTTTTTCCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

84.2

27.6

Major BPS

68.8

0.47

1.2

63.4

Major PPT

91.4

0.93

0.6

87.9

22.3

Minor 5ss

44.8

-0.6

2.8

61.7

43.1

Minor BPS

55.3

0.16

74.67

37.4

Associated Gene:

Gene:

COL8A1

Ensembl Gene ID:

ENSAPLG00000029430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030908

86990676 - 87060383

69708