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Intron Name: Anas_platyrhynchos_platyrhynchos_1_87246016_87246936_F

Intron Information:

Intron Rank:

136356

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

87246016 - 87246936

Intron Length:

921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CATTTGGAAATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CTGGCCTCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

74.4

36.1

Major BPS

0.62

1.4

85.7

34.9

Major PPT

56.1

0.14

1.1

51.3

41.7

Minor 5ss

34.5

-1.8

3.3

44.7

43.5

Minor BPS

46.4

-0.2

2.1

63.28

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018961

87245943 - 87254520

8578