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Intron Name: Anas_platyrhynchos_platyrhynchos_1_87251814_87253211_F

Intron Information:

Intron Rank:

136358

Intron Class:

major

Intron Phase:

Intron Coordinates:

87251814 - 87253211

Intron Length:

1398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

ACGTTTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

CTTATTTTAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

67.8

0.4

0.9

67.5

38.4

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

56.8

0.19

1.7

65.81

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044106

87246137 - 87254520

8384

ENSAPLT00000018961

87245943 - 87254520

8578