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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8743585_8749251_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8743585 - 8749251

Intron Length:

5667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TTATGTAAACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATGTAAAC

Flanking Amino Acid:

EECIIKGRDADECANYVRVL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

52.4

0.06

1.2

51.7

45.2

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

50.4

-0

2.2

72.42

38.5

Associated Gene:

Gene:

SEMA3E

Ensembl Gene ID:

ENSAPLG00000013554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043687

8659024 - 8806419

147396

ENSAPLT00000019752

8659024 - 8806419

147396

ENSAPLT00000014165

8659024 - 8806419

147396