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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8749372_8755270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8749372 - 8755270

Intron Length:

5899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

ATTTCAACAAAT

Flanking Amino Acid:

TFIRVGHPSEKLQIRKNLTA

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

0.79

0.8

83.7

25.7

Major PPT

72.7

0.51

0.9

70.7

35.2

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

47.8

-0

2.1

75.08

40.5

Associated Gene:

Gene:

SEMA3E

Ensembl Gene ID:

ENSAPLG00000013554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043687

8659024 - 8806419

147396

ENSAPLT00000019752

8659024 - 8806419

147396