Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_87549922_87561407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87549922 - 87561407

Intron Length:

11486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

GGTTTATTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TCATCCCTAACA

Flanking Amino Acid:

TPLPRQSQITITDAFRQSIP

Intron Amino Acid Position:

973

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.41

1.1

64.7

45.2

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

69.6

0.61

1.7

77.22

39.4

Associated Gene:

Gene:

FILIP1L

Ensembl Gene ID:

ENSAPLG00000010761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028693

87530462 - 87561964

31503

ENSAPLT00000011212

87530462 - 87563001

32540