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Intron Name: Anas_platyrhynchos_platyrhynchos_1_87603110_87603231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87603110 - 87603231

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTTTAT

5'SS Class:

major

3'SS Sequence:

CTCCTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

TCCTTTTTAAAG

Flanking Amino Acid:

AKECSIYLVGGSIPEEDGGK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

76.8

34.6

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

0.58

77.1

Minor 5ss

40.5

-1.1

3.2

57.9

46.8

Minor BPS

59.5

0.16

1.5

59.29

43.1

Associated Gene:

Gene:

NIT2

Ensembl Gene ID:

ENSAPLG00000011598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012141

87600765 - 87608611

7847