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Intron Name: Anas_platyrhynchos_platyrhynchos_1_87604687_87605660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87604687 - 87605660

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

GTTTTGAGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

GTTTTGAGAACA

Flanking Amino Acid:

PGNSFSMFDTPYCKVGLGIC

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.3

74.4

37.7

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

64.1

0.32

1.1

59.1

45.1

Minor 5ss

35.7

-1.6

2.9

46.9

41.8

Minor BPS

45.8

-0.3

2.3

65.77

40.2

Associated Gene:

Gene:

NIT2

Ensembl Gene ID:

ENSAPLG00000011598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012141

87600765 - 87608611

7847