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Intron Name: Anas_platyrhynchos_platyrhynchos_1_87608061_87608431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87608061 - 87608431

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCTGTTTTAATA

Flanking Amino Acid:

AEETVIYTDIDLKKLAEIRQ

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.3

0.66

0.7

69.9

30.9

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

59.5

0.3

1.4

62.57

38.8

Associated Gene:

Gene:

NIT2

Ensembl Gene ID:

ENSAPLG00000011598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012141

87600765 - 87608611

7847