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Intron Name: Anas_platyrhynchos_platyrhynchos_1_87639555_87643232_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

87639555 - 87643232

Intron Length:

3678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGGTTTAT

5'SS Class:

weak_major

3'SS Sequence:

TGTGCACTGTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AATGTGATAACT

Flanking Amino Acid:

VCNIPSACLCRRHNHCDMIT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.9

0.05

1.1

56.8

38.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

47.4

-0.1

1.7

55.2

44.8

Minor 5ss

37.1

-1.5

3.3

48.9

47.3

Minor BPS

45.9

-0.2

2.3

67.96

42.7

Associated Gene:

Gene:

LNP1

Ensembl Gene ID:

ENSAPLG00000012057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012540

87639366 - 87647967

8602