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Intron Name: Anas_platyrhynchos_platyrhynchos_1_87705081_87707218_F


Intron Information:

Intron Rank:
5

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
87705081 - 87707218

Intron Length:
2138

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGATTT

5'SS Class:
strong_major

3'SS Sequence:
TTGCCTTTCAGAG|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
ATTGAAA

U12 Branch Point Sequence:
TTGTCCAGGACT

Flanking Amino Acid:
FIVTMSAIGWERSFGIKKRF

Intron Amino Acid Position:
306

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.6
0.82
0.9
81.6
33.2

Major BPS
56.6
0.17
1.3
67.7
36.5

Major PPT
58.5
0.19
1.7
67.9
37.6

Minor 5ss
43.4
-0.7
3.2
57.2
46.9

Minor BPS
59.4
0.38
1.8
81.29
40.2

Associated Gene:

Gene:
ADGRG7

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

87696646 - 87709853
13208