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Intron Name: Anas_platyrhynchos_platyrhynchos_1_87926512_87929405_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

87926512 - 87929405

Intron Length:

2894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTTAC

5'SS Class:

major

3'SS Sequence:

CCCCTCAAAATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

TTCCCCTCAAAA

Flanking Amino Acid:

QLLSEQFVSQIQKVFEGLPG

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

74.5

32.2

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

55.8

0.13

0.9

51.3

30.1

Minor 5ss

40.6

-1.1

2.8

45.2

Minor BPS

60.1

0.31

1.7

70.84

40.8

Associated Gene:

Gene:

IMPG2

Ensembl Gene ID:

ENSAPLG00000013567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014122

87908611 - 88050175

141565