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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8792796_8793976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8792796 - 8793976

Intron Length:

1181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAACTGT

5'SS Class:

major

3'SS Sequence:

TCCTATTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTCTAAGT

Flanking Amino Acid:

VILEELQVFKVPVPIISMEI

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

68.2

39.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.67

0.8

72.7

37.2

Minor 5ss

39.5

-1.2

3.2

55.9

48.3

Minor BPS

0.39

1.9

83.74

37.5

Associated Gene:

Gene:

SEMA3E

Ensembl Gene ID:

ENSAPLG00000013554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019752

8659024 - 8806419

147396

ENSAPLT00000014165

8659024 - 8806419

147396