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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8792796_8797427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8792796 - 8797427

Intron Length:

4632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAACTGT

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

ATATATATATTT

Flanking Amino Acid:

VILEELQVFKQQLYIGSESV

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

68.2

39.6

Major BPS

71.4

0.53

67.3

39.3

Major PPT

95.2

1.02

0.5

28.1

Minor 5ss

39.5

-1.2

3.2

55.9

48.3

Minor BPS

45.6

-0.2

1.9

65.18

39.4

Associated Gene:

Gene:

SEMA3E

Ensembl Gene ID:

ENSAPLG00000013554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043687

8659024 - 8806419

147396