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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8794019_8797427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8794019 - 8797427

Intron Length:

3409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

ATATATATATTT

Flanking Amino Acid:

IISMEISSKRQQLYIGSESV

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

90.9

28.7

Major BPS

71.4

0.53

67.3

39.3

Major PPT

95.2

1.02

0.5

28.1

Minor 5ss

41.2

-1

2.9

52.2

44.4

Minor BPS

45.6

-0.2

1.9

65.18

39.4

Associated Gene:

Gene:

SEMA3E

Ensembl Gene ID:

ENSAPLG00000013554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019752

8659024 - 8806419

147396

ENSAPLT00000014165

8659024 - 8806419

147396