Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_88066657_88067546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88066657 - 88067546

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGATTTTTATTT

Flanking Amino Acid:

EEVRETGAVTNLIVYPPPPA

Intron Amino Acid Position:

733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

80.7

31.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.9

0.85

0.7

81.4

35.9

Minor 5ss

48.1

-0.2

2.4

63.2

35.1

Minor BPS

58.8

0.35

1.5

72.71

38.8

Associated Gene:

Gene:

SENP7

Ensembl Gene ID:

ENSAPLG00000002660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002709

88056736 - 88092560

35825