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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88067675_88068730_R


Intron Information:

Intron Rank:
13

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
88067675 - 88068730

Intron Length:
1056

Sequence Information:

Terminal Dinucleotides:
GT-CA

5'SS Sequence:
CAG|GTTAGTGAG

5'SS Class:
strong_major

3'SS Sequence:
CTGGTAGAAATCA|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATTATTT

Flanking Amino Acid:
TSYAHEPAFQKPKVARPSYA

Intron Amino Acid Position:
691

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.5
0.77
1.1
73.5
37.5

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
14.7
-2
3.9
28.8
35.2

Minor 5ss
28.4
-2.5
2.9
31.8
42.6

Minor BPS
62.5
0.47
1.8
84.55
36.3

Associated Gene:

Gene:
SENP7

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

88056736 - 88092560
35825