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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88075345_88076143_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
88075345 - 88076143

Intron Length:
799

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGTAAT

5'SS Class:
major

3'SS Sequence:
TTTTTTAACACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
CTTTTTTTAACA

Flanking Amino Acid:
TCRRRELQKKENKNCDELDK

Intron Amino Acid Position:
251

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.4
0.67
1.1
80.8
32.8

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
81.5
0.71
0.9
77.7
34.4

Minor 5ss
39.8
-1.1
2.5
51.4
45.2

Minor BPS
79.3
0.92
1.1
82.25
33.1

Associated Gene:

Gene:
SENP7

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

88056736 - 88092560
35825