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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88104354_88107904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88104354 - 88107904

Intron Length:

3551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAACACG

5'SS Class:

major

3'SS Sequence:

TCGACTTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTCGACTTCACC

Flanking Amino Acid:

KARRPQQPAGGPEEEAEKPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

64.7

41.1

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

66.6

0.37

41.7

Minor 5ss

33.6

-1.9

2.9

40.4

45.5

Minor BPS

0.01

2.1

66.93

44.8

Associated Gene:

Gene:

PCNP

Ensembl Gene ID:

ENSAPLG00000023880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038986

88104296 - 88111875

7580