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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88123577_88127805_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

88123577 - 88127805

Intron Length:

4229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAACCTT

5'SS Class:

weak_major

3'SS Sequence:

TCAGGCAACTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAG

U12 Branch Point Sequence:

TTTTTCCTAGCC

Flanking Amino Acid:

DYKCPVSLFCLDYNLLNFSK

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.2

59.3

45.1

Major BPS

60.8

0.27

1.6

71.4

45.1

Major PPT

56.3

0.14

51.7

41.6

Minor 5ss

46.1

-0.4

3.3

74.9

Minor BPS

61.4

0.34

1.9

78.87

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003519

88123501 - 88130374

6874