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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88130911_88132502_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

88130911 - 88132502

Intron Length:

1592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTACTGCAG

5'SS Class:

weak_major

3'SS Sequence:

GCTTCTTTGGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AAAATTATAACA

Flanking Amino Acid:

PVAKHELVFVTFLSIYTHFF

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.1

47.2

42.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

64.2

0.32

1.2

67.1

38.3

Minor 5ss

30.8

-2.2

3.5

41.3

Minor BPS

48.9

-0

1.6

57.45

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018251

88130831 - 88134912

4082