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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88131811_88135260_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

88131811 - 88135260

Intron Length:

3450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGTGTGTG

5'SS Class:

major

3'SS Sequence:

GGGCCTTGTGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTGTTTATGACA

Flanking Amino Acid:

VTGEETESCQSSSKHCLSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.28

1.1

57.8

41.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

52.5

0.06

1.2

51.9

41.9

Minor 5ss

38.9

-1.2

3.3

47.2

Minor BPS

57.3

0.22

1.6

70.26

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018876

88129459 - 88135287

5829