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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88173616_88181289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

88173616 - 88181289

Intron Length:

7674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTAATAGAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

90.7

1.01

0.7

19.9

Major PPT

84.2

0.77

0.7

76.8

31.8

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

47.9

-0.1

1.9

67.44

38.2

Associated Gene:

Gene:

NXPE3

Ensembl Gene ID:

ENSAPLG00000004114

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004215

88173403 - 88189594

16192