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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88209098_88209999_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88209098 - 88209999

Intron Length:

902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTCTCTCAAAA

Flanking Amino Acid:

SSGTAAEDCKAQGGLVNYEQ

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

69.9

0.45

72.4

31.3

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

61.2

0.35

1.6

74.5

36.4

Associated Gene:

Gene:

NFKBIZ

Ensembl Gene ID:

ENSAPLG00000004175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004301

88208284 - 88215092

6809