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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88210249_88210364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88210249 - 88210364

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTTTTCTGACAG

Flanking Amino Acid:

RQANIHPHLLTPPQTPTSMD

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.5

41.1

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

82.7

0.74

0.9

79.9

32.2

Minor 5ss

47.6

-0.2

2.8

61.4

44.4

Minor BPS

51.4

-0

1.9

65.14

42.5

Associated Gene:

Gene:

NFKBIZ

Ensembl Gene ID:

ENSAPLG00000004175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004301

88208284 - 88215092

6809