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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88211129_88211565_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88211129 - 88211565

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

CTCTTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGTAT

U12 Branch Point Sequence:

GGTTGTGTAACT

Flanking Amino Acid:

QFLAKDSDGDTFLHIAVAQG

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

74.9

35.3

Major BPS

53.8

0.09

1.6

57.4

49.1

Major PPT

82.8

0.74

0.7

77.1

24.9

Minor 5ss

31.3

-2.1

3.2

40.8

38.7

Minor BPS

48.8

-0

2.4

73.04

43.9

Associated Gene:

Gene:

NFKBIZ

Ensembl Gene ID:

ENSAPLG00000004175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004301

88208284 - 88215092

6809