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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88212150_88212482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88212150 - 88212482

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCACTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TAGACCTAAACA

Flanking Amino Acid:

AEKGHAQVLQAIQKGAMGSN

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

70.6

0.46

0.8

64.9

30.6

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

61.5

0.36

1.7

69.4

42.6

Associated Gene:

Gene:

NFKBIZ

Ensembl Gene ID:

ENSAPLG00000004175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004301

88208284 - 88215092

6809