Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_8822949_8823871_R

Intron Information:

Intron Rank:

138228

Intron Class:

minor

Intron Phase:

Intron Coordinates:

8822949 - 8823871

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATCCTCT

5'SS Class:

strong_minor

3'SS Sequence:

AAAAGTTTATCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

CATTCCTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.2

58.7

41.2

Major BPS

69.7

0.49

59.9

38.5

Major PPT

59.8

0.22

1.1

47.5

Minor 5ss

84.3

1.16

1.3

82.8

Minor BPS

75.9

0.81

1.4

78.12

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030383

8822847 - 8829498

6652