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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8823997_8829302_R

Intron Information:

Intron Rank:

138229

Intron Class:

major

Intron Phase:

Intron Coordinates:

8823997 - 8829302

Intron Length:

5306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTCCATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGATTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

78.2

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.3

0.84

0.7

82.1

28.1

Minor 5ss

39.6

-1.2

2.8

49.5

40.3

Minor BPS

64.9

0.55

1.2

74.15

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030383

8822847 - 8829498

6652