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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88420715_88432965_F

Intron Information:

Intron Rank:

128772

Intron Class:

major

Intron Phase:

Intron Coordinates:

88420715 - 88432965

Intron Length:

12251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGCCATGTCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

ATACTATTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

0.29

0.9

56.5

38.5

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

49.4

0.04

1.8

69.98

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028411

88420147 - 88433268

13122

ENSAPLT00000025748

88420147 - 88472673

52527