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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88573850_88576510_F

Intron Information:

Intron Rank:

140069

Intron Class:

major

Intron Phase:

Intron Coordinates:

88573850 - 88576510

Intron Length:

2661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TCATGTTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTTTGTTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

78.8

38.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

71.3

0.48

1.1

45.4

Minor 5ss

49.3

-0

2.8

65.3

45.9

Minor BPS

68.7

0.57

1.8

77.59

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047188

88573676 - 88606469

32794