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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88576584_88606104_F

Intron Information:

Intron Rank:

140068

Intron Class:

major

Intron Phase:

Intron Coordinates:

88576584 - 88606104

Intron Length:

29521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTGTTCTGAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

80.7

31.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

68.3

0.41

1.2

71.2

38.9

Minor 5ss

42.5

-0.8

3.5

64.3

47.2

Minor BPS

59.4

0.16

1.6

65.25

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047188

88573676 - 88606469

32794

ENSAPLT00000030651

88559243 - 88606469

47227