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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8887227_8888622_F

Intron Information:

Intron Rank:

138700

Intron Class:

major

Intron Phase:

Intron Coordinates:

8887227 - 8888622

Intron Length:

1396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTCAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTATTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.7

80.3

32.2

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

66.6

0.52

1.3

70.89

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023385

8881518 - 8888914

7397