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Intron Name: Anas_platyrhynchos_platyrhynchos_1_88878888_88883668_F

Intron Information:

Intron Rank:

145204

Intron Class:

major

Intron Phase:

Intron Coordinates:

88878888 - 88883668

Intron Length:

4781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTAACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

CTTTGCTTAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

71.1

0.47

66.7

38.4

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

70.3

0.5

1.9

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019771

88878885 - 88903922

25038

ENSAPLT00000020706

88878885 - 88902762

23878