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Intron Name: Anas_platyrhynchos_platyrhynchos_1_89277351_89277856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89277351 - 89277856

Intron Length:

506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACGC

5'SS Class:

strong_major

3'SS Sequence:

TGGCCGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTACTAC

U12 Branch Point Sequence:

GTGGTACTACGT

Flanking Amino Acid:

PAARSPLPAARQRVLSAPQS

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

65.9

40.1

Major BPS

43.8

-0.3

1.4

38.5

40.9

Major PPT

64.1

0.32

1.1

57.3

43.2

Minor 5ss

26.9

-2.7

2.9

33.5

41.8

Minor BPS

35.1

-1

2.1

49.52

43.9

Associated Gene:

Gene:

ALCAM

Ensembl Gene ID:

ENSAPLG00000012031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023189

89276536 - 89390328

113793