Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_89443499_89446031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89443499 - 89446031

Intron Length:

2533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TAGCCTTTGAAA

Flanking Amino Acid:

RHELPVEGAKVFSNGHLINE

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

76.8

0.6

0.9

74.4

40.4

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

55.2

0.16

1.4

61.69

38.1

Associated Gene:

Gene:

CBLB

Ensembl Gene ID:

ENSAPLG00000011898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018002

89419944 - 89553907

133964

ENSAPLT00000012399

89419944 - 89553907

133964

ENSAPLT00000024461

89419944 - 89553907

133964