Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_89466162_89468141_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89466162 - 89468141

Intron Length:

1980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTATCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCTATTAATC

Flanking Amino Acid:

RLQKYSTKPGSYIFRLSCTR

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.9

0.51

1.1

72.3

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

66.2

0.49

1.5

76.75

32.7

Associated Gene:

Gene:

CBLB

Ensembl Gene ID:

ENSAPLG00000011898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018002

89419944 - 89553907

133964

ENSAPLT00000012399

89419944 - 89553907

133964

ENSAPLT00000024461

89419944 - 89553907

133964