Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_89922763_89922857_F

Intron Information:

Intron Rank:

129982

Intron Class:

major

Intron Phase:

Intron Coordinates:

89922763 - 89922857

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGCATTC

5'SS Class:

major

3'SS Sequence:

TTCTCTTCAGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATCAA

U12 Branch Point Sequence:

TACTCCTGTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.2

62.9

38.7

Major BPS

66.7

0.42

1.1

69.7

35.6

Major PPT

80.6

0.69

0.8

77.9

29.3

Minor 5ss

41.2

-1

3.4

58.5

46.3

Minor BPS

61.2

0.43

1.8

78.11

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038288

89921333 - 89923082

1750