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Intron Name: Anas_platyrhynchos_platyrhynchos_1_89965508_89984848_F

Intron Information:

Intron Rank:

142285

Intron Class:

major

Intron Phase:

Intron Coordinates:

89965508 - 89984848

Intron Length:

19341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTGATTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TATGTTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

79.8

35.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.3

0.73

0.8

81.3

36.3

Minor 5ss

37.9

-1.4

47.1

42.6

Minor BPS

61.1

0.43

1.3

74.42

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027829

89965054 - 89984962

19909