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Intron Name: Anas_platyrhynchos_platyrhynchos_1_90002446_90015283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

90002446 - 90015283

Intron Length:

12838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTACTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TGTACTTTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

70.1

0.5

70.3

31.9

Major PPT

82.6

0.73

0.9

76.1

37.8

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

62.7

0.39

1.7

72.97

38.4

Associated Gene:

Gene:

BBX

Ensembl Gene ID:

ENSAPLG00000005336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026161

90002367 - 90125801

123435