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Intron Name: Anas_platyrhynchos_platyrhynchos_1_90073104_90075215_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

90073104 - 90075215

Intron Length:

2112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCACGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TTCTTGTGAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

35.5

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

71.4

0.48

67.2

39.1

Minor 5ss

36.6

-1.5

3.1

46.6

48.7

Minor BPS

53.8

0.11

2.2

71.44

Associated Gene:

Gene:

BBX

Ensembl Gene ID:

ENSAPLG00000005336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019267

90072891 - 90125801

52911