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Intron Name: Anas_platyrhynchos_platyrhynchos_1_90095049_90099632_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

90095049 - 90099632

Intron Length:

4584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAATAG

5'SS Class:

major

3'SS Sequence:

ATTTAAAACCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

GTTCATTTAAAA

Flanking Amino Acid:

EESALFQFAEISSNTSQLSS

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

63.7

37.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

58.9

0.2

49.9

42.4

Minor 5ss

42.7

-0.8

55.2

Minor BPS

57.4

0.23

1.6

68.32

37.1

Associated Gene:

Gene:

BBX

Ensembl Gene ID:

ENSAPLG00000005336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023194

90031410 - 90128316

96907

ENSAPLT00000037991

90000774 - 90128302

127529

ENSAPLT00000022901

89999939 - 90128316

128378

ENSAPLT00000034554

90031410 - 90125801

94392

ENSAPLT00000019267

90072891 - 90125801

52911

ENSAPLT00000034025

89999939 - 90125801

125863

ENSAPLT00000005542

89999939 - 90135199

135261

ENSAPLT00000026161

90002367 - 90125801

123435

ENSAPLT00000041239

90000774 - 90125801

125028