Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90124746 - 90125424

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

GCAAGCTTAACT

Flanking Amino Acid:

GRVSPAGGTLEEKPKDLPQS

Intron Amino Acid Position:

901

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

89.3

0.88

0.8

87.9

29.4

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

57.5

0.31

1.9

70.47

45.8

Associated Gene:

Gene:

BBX

Ensembl Gene ID:

ENSAPLG00000005336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022901

89999939 - 90128316

128378

ENSAPLT00000034378

89999939 - 90128316

128378

ENSAPLT00000041239

90000774 - 90125801

125028

ENSAPLT00000019267

90072891 - 90125801

52911

ENSAPLT00000034025

89999939 - 90125801

125863

ENSAPLT00000037991

90000774 - 90128302

127529

ENSAPLT00000005542

89999939 - 90135199

135261

ENSAPLT00000026161

90002367 - 90125801

123435

ENSAPLT00000023194

90031410 - 90128316

96907

ENSAPLT00000034554

90031410 - 90125801

94392

Intron Name: Anas_platyrhynchos_platyrhynchos_1_90124746_90125424_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: