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Intron Name: Anas_platyrhynchos_platyrhynchos_1_90205884_90206901_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90205884 - 90206901

Intron Length:

1018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGCAC

5'SS Class:

major

3'SS Sequence:

TGTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GCTTTGTCATCG

Flanking Amino Acid:

YRSAQALLSEAKEKYQEGSG

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

63.9

42.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

88.8

0.87

0.7

36.6

Minor 5ss

36.6

-1.5

3.3

50.1

46.5

Minor BPS

40.9

-0.8

2.3

47.47

45.8

Associated Gene:

Gene:

IFT57

Ensembl Gene ID:

ENSAPLG00000005696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005896

90204087 - 90211904

7818