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Intron Name: Anas_platyrhynchos_platyrhynchos_1_90623745_90625068_F

Intron Information:

Intron Rank:

140765

Intron Class:

major

Intron Phase:

Intron Coordinates:

90623745 - 90625068

Intron Length:

1324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

AAAATCAGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

72.5

0.56

1.2

63.4

Major PPT

88.2

0.86

0.7

85.4

29.3

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

43.4

-0.4

1.7

57.01

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047534

90622933 - 90681031

58099