Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_90992569_90998427_R

Intron Information:

Intron Rank:

136708

Intron Class:

major

Intron Phase:

Intron Coordinates:

90992569 - 90998427

Intron Length:

5859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACAA

5'SS Class:

major

3'SS Sequence:

CTTACATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTATATTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.7

36.3

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

75.4

0.57

0.9

68.6

36.1

Minor 5ss

31.3

-2.1

39.2

Minor BPS

62.2

0.46

1.8

81.67

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026829

90991437 - 90998614

7178