Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_90998575_91006233_R

Intron Information:

Intron Rank:

136710

Intron Class:

major

Intron Phase:

Intron Coordinates:

90998575 - 91006233

Intron Length:

7659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTGCCATTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CTAGCTTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

77.3

0.68

79.3

29.4

Major PPT

64.2

0.32

1.1

65.9

39.4

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

68.2

0.55

1.4

70.6

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044531

90991180 - 91007022

15843