Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_91517898_91531268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

91517898 - 91531268

Intron Length:

13371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCATTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATTT

Flanking Amino Acid:

ELSSLQFQLLRSAIKALRPG

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

100

1.24

0.5

100

Major PPT

82.7

0.74

0.9

77.3

35.7

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

68.3

0.65

1.8

89.23

35.4

Associated Gene:

Gene:

NSUN3

Ensembl Gene ID:

ENSAPLG00000011623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012108

91517468 - 91535459

17992