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Intron Name: Anas_platyrhynchos_platyrhynchos_1_91542852_91546672_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

91542852 - 91546672

Intron Length:

3821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATTTAA

5'SS Class:

major

3'SS Sequence:

ACTTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTTGCAAGAACG

Flanking Amino Acid:

LEPLGETHHAGTKIVCQL*

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

74.8

30.7

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

83.1

0.75

0.8

76.6

31.4

Minor 5ss

39.7

-1.2

2.8

46.3

44.2

Minor BPS

46.9

-0.3

2.1

62.84

44.3

Associated Gene:

Gene:

ARL13B

Ensembl Gene ID:

ENSAPLG00000011691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033972

91542775 - 91585246

42472