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Intron Name: Anas_platyrhynchos_platyrhynchos_1_91548644_91550954_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

91548644 - 91550954

Intron Length:

2311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCTCT

5'SS Class:

weak_major

3'SS Sequence:

AACAATAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAATAAA

U12 Branch Point Sequence:

AAAACAATAAAA

Flanking Amino Acid:

AERVRRIREEREREEGRSVP

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.9

39.1

Major BPS

58.5

0.21

1.1

59.9

32.5

Major PPT

-0.2

1.1

35.9

37.3

Minor 5ss

59.3

0.31

2.3

74.9

41.1

Minor BPS

44.1

-0.4

1.9

53.29

37.1

Associated Gene:

Gene:

ARL13B

Ensembl Gene ID:

ENSAPLG00000011691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033972

91542775 - 91585246

42472

ENSAPLT00000019036

91541598 - 91585246

43649

ENSAPLT00000018920

91544839 - 91585246

40408

ENSAPLT00000012180

91541598 - 91585246

43649